BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E08LP1|AL426050
(810 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig731 1582 0.0
>3x_Contig731
Length = 3248
Score = 1582 bits (798), Expect = 0.0
Identities = 808/810 (99%), Gaps = 1/810 (0%)
Strand = Plus / Plus
Query: 1 cattagacctttggatgttgaagctatcatcaacactgtcaagaagaccaaccacttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cattagacctttggatgttgaagctatcatcaacactgtcaagaagaccaaccacttgat 641
Query: 61 tactgttgaatctactttcccagctttcggtgttggtgctgaaattatcgctcaaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tactgttgaatctactttcccagctttcggtgttggtgctgaaattatcgctcaaattat 701
Query: 121 ggaatctgaagccttcgattatttggatgctccaattcaaagagttactggtgctgaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ggaatctgaagccttcgattatttggatgctccaattcaaagagttactggtgctgaagt 761
Query: 181 cccaactccttatgctaaggaattagaagattttgctttcccagaccctgacaccattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 cccaactccttatgctaaggaattagaagattttgctttcccagaccctgacaccattgt 821
Query: 241 cagagctgctaaaagtgttttgtctattgaatgattgcaccgtgcactctttctttactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 cagagctgctaaaagtgttttgtctattgaatgattgcaccgtgcactctttctttactg 881
Query: 301 acagttatgcacctctgttggcctccgttttttatcaaaacaaaagagaatattcattgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 acagttatgcacctctgttggcctccgttttttatcaaaacaaaagagaatattcattgg 941
Query: 361 ataaggaatagtgcatgatggttcattcgcattcggtttttcttatgattgtactccttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 ataaggaatagtgcatgatggttcattcgcattcggtttttcttatgattgtactccttt 1001
Query: 421 gttgcaataaactaagttatgaattgatttacaaacttcaaagaaaaatagaaaaattaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gttgcaataaactaagttatgaattgatttacaaacttcaaagaaaaatagaaaaattaa 1061
Query: 481 aacatattatattattaagatatgaataccaagttcagttaatacacgattttggattag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 aacatattatattattaagatatgaataccaagttcagttaatacacgattttggattag 1121
Query: 541 gaaatagaatgagatagagttgcctgtcgttgaattattcgctggtaaaggtaagttgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 gaaatagaatgagatagagttgcctgtcgttgaattattcgctggtaaaggtaagttgat 1181
Query: 601 gaattagagattttacacattttttttcatgtatgttgcccatcagtaatgatgaagaaa 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 gaattagagattttaca-attttttttcatgtatgttgcccatcagtaatgatgaagaaa 1240
Query: 661 agttttcatcaccagagatgggaacaataaggtatttggggacaactgcggttgttatga 720
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 agttttcatcactagagatgggaacaataaggtatttggggacaactgcggttgttatga 1300
Query: 721 gattaaactgtatatatatattctgccgttaaaacaagacgctgtgcgctactttctgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 gattaaactgtatatatatattctgccgttaaaacaagacgctgtgcgctactttctgta 1360
Query: 781 caacttgtcgttatttccatcaaggtattg 810
||||||||||||||||||||||||||||||
Sbjct: 1361 caacttgtcgttatttccatcaaggtattg 1390
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,131
Number of Sequences: 1807
Number of extensions: 10131
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 810
length of database: 10,358,551
effective HSP length: 16
effective length of query: 794
effective length of database: 10,329,639
effective search space: 8201733366
effective search space used: 8201733366
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)